Installation
General Use
Load data
Parser
Continuous vs Profile
Data Representation
Data visualisation
Region of Interest
Ensure consistent m/z axis
Spectral Preprocessing
Normalisation
Spectral Representation
Multivariate analysis
Principal Component Analysis (PCA)
Advanced Use
Tutorials and example data
Scripting - datacube / kmeans
Using SpectralAnalysis in python
Development Roadmap
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SpectralAnalysis
> General Use
Feature List
Supported Data Formats
General Use
Feature List
Load spectral imaging data
(mass spectrometry imaging, Raman)
Visualise spectra and images
(generate images, view spectra)
Region of interest
(generation and statistics)
Spectral pre-processing
Multivariate analysis
(PCA, NMF, pLSA)
Clustering
Multimodality data analysis
Supported Data Formats
imzML
the open mass spectrometry imaging format (.imzML)
ION-TOF export (.grd or .tof)
ASCII export from Raman spectroscopy (*.txt)